ZFIN ID: ZDB-GENE-030722-3
Gene Name: slit homolog 1a (Drosophila)
Gene Symbol: slit1a
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 12 figures from 10 publications
Wild-type Stages, Structures: Cleavage:16-cell (1.5h-1.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
  central nervous system, diencephalon, diencephalon antero-medial region, forebrain (all 12) expand
PHENOTYPE
Data: 2 figures from 2 publications
Observed in: postoptic commissure, retinal ganglion cell axon, retinal ganglion cell cysteine-type endopeptidase activity
DISEASE ASSOCIATED WITH slit1a HUMAN ORTHOLOGNo data available
GENE ONTOLOGY
Ontology GO Term
Biological Process positive regulation of axon extension (more)
Cellular Component extracellular region (more)
Molecular Function calcium ion binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000152 (1)
  • InterPro:IPR000372 (1)
  • InterPro:IPR000483 (1)
  • InterPro:IPR000742 (1)
  • InterPro:IPR001611 (1)
  • InterPro:IPR001791 (1)
  • InterPro:IPR001881 (1)
  • InterPro:IPR003591 (1)
  • InterPro:IPR006207 (1)
  • InterPro:IPR013032 (1)
  • InterPro:IPR013320 (1)
  • InterPro:IPR018097 (1)
  • InterPro:IPR032675 (1)
  • PROSITE:PS00010 (1)
  • PROSITE:PS00022 (1)
  • PROSITE:PS01185 (1)
  • PROSITE:PS01186 (1)
  • PROSITE:PS01187 (1)
  • PROSITE:PS01225 (1)
  • PROSITE:PS50025 (1)
  • PROSITE:PS50026 (1)
  • PROSITE:PS51450 (1)
  • Pfam:PF00008 (1)
  • Pfam:PF01462 (1)
  • Pfam:PF01463 (1)
  • Pfam:PF02210 (1)
  • Pfam:PF12661 (1)
  • Pfam:PF13855 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA slit1a-001 (1) 6008
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM slit1a
    tgbac(slit1a:cre,myl7:cerulean), tgbac(slit1a:gal4-vp16,myl7:mcherry)
    MARKER RELATIONSHIPS
    slit1aContained in: [BAC] CH211-178H7 (1) (order this), DKEY-58O21 (1) (order this)
    slit1aEncodes: [cDNA] MGC:195059 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001034968 (1) 6037bp
    Genomic GenBank:BX005147 (1) 147683bp
    Select Tool
    Polypeptide UniProtKB:B3DJM7 (1) 1524aa
    Sequence Clusters UniGene:88478 (1)
    Sequence Information (all 16)
    OTHER slit1a GENE PAGES
  • Alliance (1)
  • Gene:556123 (1)
  • VEGA:OTTDARG00000029347 (1)
  • Ensembl(GRCz10):ENSDARG00000044954 (1)
  • ORTHOLOGY for slit1a (Chr: 13)
    CITATIONS (45)