ZFIN ID: ZDB-GENE-030721-2
Gene Name: DIX domain containing 1a
Gene Symbol: dixdc1a    Nomenclature History

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Previous Names: ccd1 (1), dixdc1 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 15 Mapping Details/Browsers
Description: Exhibits identical protein binding activity. Involved in camera-type eye development; canonical Wnt signaling pathway; and forebrain development. Predicted to localize to cytosol. Orthologous to human DIXDC1 (DIX domain containing 1).
Genome Resources: Alliance (1),  Gene:360137 (1),  Ensembl(GRCz11):ENSDARG00000025302 (2)
GENE EXPRESSION
All Expression Data: text only from Shiomi et al., 2003
Wild-type Stages, Structures: Gastrula:Shield (6.0h-8.0h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa12284 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35851 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sdu18 Insertion Exon 2 Unknown TALEN
    Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    TALEN1-dixdc1a 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH dixdc1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH dixdc1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process canonical Wnt signaling pathway (more)
    Cellular Component cell junction (more)
    Molecular Function identical protein binding (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA dixdc1a-201 (1)    Ensembl 2480
    ncRNA dixdc1a-002 (1)    Ensembl 537
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    SignaFish
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM dixdc1a No data available
    MARKER RELATIONSHIPS
    dixdc1a Contained in: [BAC] CH211-247L8 (1), CH211-262M14 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_182884 (1) 2474 nt
    Genomic GenBank:CR388163 (1) 182247 nt
    Select Tool
    Polypeptide UniProtKB:F1QIN5 (1) 443 aa
    Sequence Information (all 10)
    ORTHOLOGY for dixdc1a ( Chr: 15 )
    CITATIONS (26)