ZFIN ID: ZDB-GENE-030716-1
Gene Name: ETS transcription factor ELK4
Gene Symbol: elk4    Nomenclature History

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Previous Names: TCF-1 (1), tcf

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 11 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in cell differentiation and regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Is expressed in endothelial cell. Orthologous to human ELK4 (ETS transcription factor ELK4).
Genome Resources: Alliance (1),  Gene:30093 (1),  Ensembl(GRCz11):ENSDARG00000077092 (2)
GENE EXPRESSION
All Expression Data: 4 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2005 [eu114]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13508 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH elk4 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH elk4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA elk4-201 (1)    Ensembl 1520
    elk4-202 (1)    Ensembl 3317
    ncRNA elk4-002 (1)    Ensembl 241
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM elk4 No data available
    MARKER RELATIONSHIPS
    elk4 Contained in: [BAC] CH211-117K10 (1)
    elk4 Encodes: [EST] eu114 (1)
    [cDNA] MGC:114016 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_130930 (1) 1781 nt
    Genomic GenBank:AL929286 (1) 168222 nt
    Select Tool
    Polypeptide UniProtKB:F1R0K1 (1) 443 aa
    Sequence Information (all 17)
    ORTHOLOGY for elk4 ( Chr: 11 )
    CITATIONS (24)