ZFIN ID: ZDB-GENE-030616-629
Gene Name: solute carrier family 6 member 22, tandem duplicate 1
Gene Symbol: slc6a22.1    Nomenclature History

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Previous Names: slc6a13, si:ch211-263a23.7, si:zc263a23.7

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have neurotransmitter:sodium symporter activity. Predicted to localize to the integral component of membrane.
Genome Resources: Alliance (1),  Gene:368923 (1),  Ensembl(GRCz11):ENSDARG00000000730 (2)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6902274]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa20784 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH slc6a22.1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH slc6a22.1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component integral component of membrane (more)
    Molecular Function neurotransmitter:sodium symporter activity (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Family IPR000175 Sodium:neurotransmitter symporter
    Homologous_superfamily IPR037272 Sodium:neurotransmitter symporter superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA slc6a22.1-203 (1)    Ensembl 2735
    slc6a22.1-204 (1)    Ensembl 1551
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM slc6a22.1 No data available
    MARKER RELATIONSHIPS
    slc6a22.1 Contained in: [BAC] CH211-263A23 (1)
    slc6a22.1 Encodes: [EST] IMAGE:6902274 (1)
    [cDNA] MGC:162525 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001004533 (1) 2485 bp
    Genomic GenBank:AL732567 (1) 152840 bp
    Select Tool
    Polypeptide UniProtKB:Q801U6 (1) 575 aa
    Sequence Information (all 16)
    ORTHOLOGY for slc6a22.1 ( Chr: 6 )
    CITATIONS (22)