ZFIN ID: ZDB-GENE-030616-612
Gene Name: ATPase H+ transporting V1 subunit C1a
Gene Symbol: atp6v1c1a
Sequence Ontology ID : SO:0000704

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Previous Names: atp6v1c1, si:zc215i13.2, wu:fd12h05

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:64034]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH atp6v1c1a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH atp6v1c1a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process ATP hydrolysis coupled proton transport (more)
Cellular Component proton-transporting V-type ATPase, V1 domain (more)
Molecular Function proton transmembrane transporter activity (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004907 (1)
  • InterPro:IPR036132 (1)
  • Pfam:PF03223 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atp6v1c1a-001 (1) 1869
    ncRNA atp6v1c1a-002 (1) 387
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM atp6v1c1a No data available
    MARKER RELATIONSHIPS
    atp6v1c1aContained in: [BAC] CH211-150A18 (1) (order this)
    atp6v1c1aEncodes: [EST] fd12h05
    [cDNA] MGC:64034 (1) (order this), MGC:191654 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201322 (1) 1854bp
    Genomic GenBank:CR524823 (1) 155648bp
    Select Tool
    Polypeptide UniProtKB:B2GPU0 (1) 383aa
    Sequence Clusters UniGene:106389 (1)
    Sequence Information (all 16)
    OTHER atp6v1c1a GENE PAGES
  • Alliance (1)
  • Gene:368907 (1)
  • VEGA:OTTDARG00000027788 (1)
  • Ensembl(GRCz11):ENSDARG00000023967 (2)
  • ORTHOLOGY for atp6v1c1a (Chr: 16)
    CITATIONS (17)