header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-030616-563
Gene Name: TATA box binding protein
Gene Symbol: tbp
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: fd20h06, si:zc101n13.2, wu:fd20h06

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits DNA binding activity. Involved in gastrulation; mRNA catabolic process; and transcription by RNA polymerase II. Predicted to localize to the transcription factor TFIID complex and  ...
GENE EXPRESSION
All Expression Data: 5 figures from 4 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:66213]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la018474Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la018475Tg Transgenic Insertion Unknown Unknown DNA
    Targeting reagents:
    DISEASE ASSOCIATED WITH tbp HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    late onset Parkinson's disease {Parkinson disease, susceptibility to} 168600
    spinocerebellar ataxia type 17 Spinocerebellar ataxia 17 607136
    DISEASE ASSOCIATED WITH tbp VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process gastrulation (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 18)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tbp-201 (1) 1774
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tbp
    MARKER RELATIONSHIPS
    tbpContained in: [BAC] CH211-101N13 (1) (order this), CH211-202M22 (1) (order this)
    tbpEncodes: [EST] fd20h06
    [cDNA] MGC:66213 (1) (order this), MGC:77761 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200096 (1) 1745bp
    Genomic GenBank:AL772154 (1) 173048bp
    Select Tool
    Polypeptide UniProtKB:Q7SXL3 (1) 302aa
    Sequence Clusters UniGene:117556 (1)
    Sequence Information (all 21)
    ORTHOLOGY for tbp (Chr: 13)
    CITATIONS (79)