ZFIN is now using GRCz12tu for Genomic Data

Gene

ftr53

ID

ZDB-GENE-030616-515

Name

finTRIM family, member 53

Symbol

ftr53 Nomenclature History

Previous Names

si:busm1-57i23.1 (1)
si:ch211-221b16.8 (1)
si:dz57i23.1

Type

protein_coding_gene

Location

Chr: 9 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

No data available

Genome Resources

Note

novel protein similar to Oncorhynchus mykiss VHSV-induced protein

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ftr53 Human Ortholog

No data available

Associated With ftr53 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

No data available

Domain Details Per Protein

No data available

Transcripts

Genome Browsers

NCBI Map Viewer

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
aberrant processed transcript	ftr53-202 (1) Ensembl	Ensembl		2,114 nt	Select Tool ZFIN BLAST
mRNA	ftr53-201 (1) Ensembl	Ensembl		2,108 nt	Select Tool ZFIN BLAST
mRNA	ftr53-203 (1) Ensembl	Ensembl		967 nt	Select Tool ZFIN BLAST
mRNA	ottdart00000002060 (1)	Havana		579 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Genome Browsers

NCBI Map Viewer

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations