ZFIN ID: ZDB-GENE-030616-51
Gene Name: ATPase phospholipid transporting 11C
Gene Symbol: atp11c    Nomenclature History

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Previous Names: fb79h04, si:bz1l9.1, wu:fb79h04

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 14 Mapping Details/Browsers
Description: Predicted to have ATPase-coupled intramembrane lipid transporter activity. Predicted to be involved in phospholipid translocation. Predicted to localize to several cellular components, including the endoplasmic reticulum; recycling endosome; and trans-Golgi network. Orthologous to human ATP11C (ATPase phospholipid transporting 11C).
Genome Resources: Alliance (1),  Gene:368385 (1),  Ensembl(GRCz11):ENSDARG00000036442 (1)
GENE EXPRESSION
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH atp11c HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
?Hemolytic anemia, congenital, X-linked 301015
DISEASE ASSOCIATED WITH atp11c VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process phospholipid translocation (more)
Cellular Component integral component of membrane (more)
Molecular Function ATPase-coupled intramembrane lipid transporter activity (more)
GO Terms (all 12)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Family IPR001757 P-type ATPase
Family IPR006539 P-type ATPase, subfamily IV
Homologous_superfamily IPR008250 P-type ATPase, A domain superfamily
PTM IPR018303 P-type ATPase, phosphorylation site
Homologous_superfamily IPR023214 HAD superfamily
Homologous_superfamily IPR023298 P-type ATPase, transmembrane domain superfamily
Homologous_superfamily IPR023299 P-type ATPase, cytoplasmic domain N
Family IPR030363 Phospholipid-transporting ATPase IG
Domain IPR032630 P-type ATPase, C-terminal
Domain IPR032631 P-type ATPase, N-terminal
Homologous_superfamily IPR036412 HAD-like superfamily
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA atp11c-201 (1)    Ensembl 4139
atp11c-202 (1)    Ensembl 411
atp11c-203 (1)    Ensembl 4157
Browsers: NCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM atp11c
Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
Tg(Hsa.SOX3-atp11c:EGFP) atp11c EGFP Danio rerioHomo sapiens 1 2
MARKER RELATIONSHIPS
atp11c Contained in: [BAC] CH211-79C4 (1), DKEY-209E11 (1) (order this), DKEYP-79E11 (1), RP71-1L9 (1)
atp11c Encodes: [EST] fb79h04
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:XM_009291177 (1)
Genomic GenBank:AL627263 174521 bp
Select Tool
Polypeptide UniProtKB:A0A286Y8A8 (1) 1181 aa
Sequence Information (all 33)
ORTHOLOGY for atp11c ( Chr: 14 )
CITATIONS (25)