ZFIN ID: ZDB-GENE-030616-178
Gene Name: vesicle amine transport 1
Gene Symbol: vat1
Sequence Ontology ID : SO:0000704

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Previous Name: si:dz163l24.2

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have cofactor binding activity; predicted to be involved in oxidation-reduction process; orthologous to human VAT1 (vesicle amine transport 1).
GENE EXPRESSION
All Expression Data: 7 figures from 2 publications
Directly Submitted Expression Data: 6 figures (13 images) from Thisse et al., 2004 [IMAGE:7143199]
Wild-type Stages, Structures: Segmentation:5-9 somites (11.66h-14.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la028870Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH vat1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH vat1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process oxidation-reduction process (more)
    Molecular Function cofactor binding (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002364 (1)
  • InterPro:IPR011032 (1)
  • InterPro:IPR013149 (1)
  • InterPro:IPR013154 (1)
  • InterPro:IPR020843 (1)
  • InterPro:IPR036291 (1)
  • PROSITE:PS01162 (1)
  • Pfam:PF00107 (1)
  • Pfam:PF08240 (1)
  • EC:1.-.-.- (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ottdart00000001487 (1) 1733
    vat1-001 (1) 4318
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM vat1 No data available
    MARKER RELATIONSHIPS
    vat1Contained in: [BAC] DKEY-267L2 (1) (order this)
    [PAC] BUSM1-163L24 (1) (order this)
    vat1Encodes: [EST] IMAGE:7143199 (1) (order this)
    [cDNA] MGC:111882 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007051 (1) 4354bp
    Genomic GenBank:CR855865 (1) 149895bp
    Select Tool
    Polypeptide UniProtKB:Q4KME8 (1) 484aa
    Sequence Clusters UniGene:107434 (1)
    Sequence Information (all 24)
    OTHER vat1 GENE PAGES
  • Alliance (1)
  • Gene:368752 (1)
  • VEGA:OTTDARG00000001378 (1)
  • VEGA:OTTDARG00000027157 (1)
  • ORTHOLOGY for vat1 (Chr: 3)
    CITATIONS (21)