gpkow

ID

ZDB-GENE-030616-159

Name

G patch domain and KOW motifs

Symbol

gpkow Nomenclature History

Previous Names

mp:zf637-1-001655
si:dz150f13.5
t54l
wu:fb38d03
zf637-1-001655
zgc:152714

Type

protein_coding_gene

Location

Chr: 8 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Predicted to enable RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to act upstream of or within RNA splicing and mRNA processing. Predicted to be located in nucleus. Predicted to be part of spliceosomal complex. Orthologous to human GPKOW (G-patch domain and KOW motifs).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7151660 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With gpkow Human Ortholog

No data available

Associated With gpkow Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000467	G-patch domain
Domain	IPR005824	KOW
Domain	IPR026822	Spp2/MOS2, G-patch domain
Domain	IPR041993	G-patch domain and KOW motifs-containing protein, KOW 1
Domain	IPR041994	G-patch domain and KOW motifs-containing protein, KOW 2
Family	IPR045166	Pre-mRNA-splicing factor Spp2-like
Homologous_superfamily	IPR008991	Translation protein SH3-like domain superfamily
Homologous_superfamily	IPR014722	Large ribosomal subunit protein uL2, domain 2