ZFIN ID: ZDB-GENE-030616-132
Gene Name: MYC binding protein 2
Gene Symbol: mycbp2    Nomenclature History

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Previous Names: esr, esrom (2), fa97c06, ns:zft368, PAM (1), si:busm1-12g7.1, si:dz12g7.1, si:dz256p4.1, til, tilsit, wu:fa97c06, xx:zft368, zft368

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 9 Mapping Details/Browsers
Description: Exhibits ubiquitin-protein transferase activity. Involved in several processes, including axonogenesis; habenula development; and regulation of pteridine metabolic process. Localizes to cytoplasm. Is expressed in several structures, including eye; heart; integument; liver; and testis. Orthologous to human MYCBP2 (MYC binding protein 2).
Genome Resources: Alliance (1),  Gene:368439 (1),  Ensembl(GRCz11):ENSDARG00000001220 (1)
GENE EXPRESSION
All Expression Data: 3 figures from 3 publications
Wild-type Stages, Structures: Cleavage:4-cell (1.0h-1.25h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la016495Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la016496Tg Transgenic Insertion Unknown Unknown DNA
    mycbp2_unspecified Unspecified Unknown Unknown
    sa17311 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21455 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa25421 Point Mutation Unknown Premature Stop ENU
    sa27372 Point Mutation Unknown Splice Site ENU
    sa34597 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41386 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • tb241a Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • te250 Small Deletion Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • te275 Insertion Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • te279 Unknown Unknown Unknown ENU
    te376 Unknown Unknown Unknown ENU
    tf4z Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tg5 Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tg06a Unknown Unknown Unknown ENU
    tg265a Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • th36b Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • th222 Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tj236 Unknown Unknown Unknown ENU
    tn207b Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tp203 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tq213c Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • ts208 Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • ty130b Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-mycbp2 N/A 1
    MO2-mycbp2 N/A 1
    DISEASE ASSOCIATED WITH mycbp2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH mycbp2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process axon choice point recognition (more)
    Cellular Component cytoplasm (more)
    Molecular Function ubiquitin-protein transferase activity (more)
    GO Terms (all 24)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA mycbp2-201 (1)    Ensembl 15337
    ottdart00000001875 (1) 2743
    ottdart00000001995 (1) 9225
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM mycbp2 No data available
    MARKER RELATIONSHIPS
    mycbp2 Contained in: [BAC] CH211-4P8 (1), CH211-221B16 (1), CH211-279B21 (1), DKEY-250A21 (1) (order this)
    [PAC] BUSM1-12G7 (1), BUSM1-256P4
    mycbp2 Encodes: [EST] fa97c06, zft368
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001012247 (1) 14184 nt
    Genomic GenBank:BX510646 (1) 200321 nt Blast at MegaBLAST
    Polypeptide UniProtKB:F1RD40 (1) 4574 aa
    Sequence Information (all 64)
    ORTHOLOGY for mycbp2 ( Chr: 9 )
    CITATIONS (45)