ZFIN ID: ZDB-GENE-030502-1
Gene Name: melanocortin 1 receptor
Gene Symbol: mc1r

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(Including Attributions)
Location: Chr: 18 Mapping Details/Browsers
GENE EXPRESSION
All Expression Data: 5 figures from 5 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Adult (90d-730d, breeding adult)
  brain, eye, female organism, head kidney (all 10) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents: MO1-mc1r (1), MO2-mc1r (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH mc1r HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
oculocutaneous albinism {Albinism, oculocutaneous, type II, modifier of} 203200
skin melanoma {Melanoma, cutaneous malignant, 5} 613099
[Analgesia from kappa-opioid receptor agonist, female-specific] 613098
[Skin/hair/eye pigmentation 2, blond hair/fair skin] 266300
{UV-induced skin damage} 266300
[Skin/hair/eye pigmentation 2, red hair/fair skin] 266300
GENE ONTOLOGY
Ontology GO Term
Biological Process G-protein coupled receptor signaling pathway (more)
Cellular Component plasma membrane (more)
Molecular Function protein binding (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000276 (1)
  • InterPro:IPR000761 (1)
  • InterPro:IPR001671 (1)
  • InterPro:IPR017452 (1)
  • PROSITE:PS00237 (1)
  • PROSITE:PS50262 (1)
  • Pfam:PF00001 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA mc1r-001 (1) 1328
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM mc1r No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    mc1rContained in: [BAC] CH211-132F3 (1) (order this)
    mc1rEncodes: [cDNA] MGC:194185 (1) (order this), MGC:194219 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_180970 (1) 972bp
    Genomic GenBank:CR457484 (1) 169672bp
    Select Tool
    Polypeptide UniProtKB:Q7ZTA3 (1) 323aa
    Sequence Clusters UniGene:87354 (1)
    Sequence Information (all 21)
    OTHER mc1r GENE PAGES
  • Gene:353151 (1)
  • VEGA:OTTDARG00000017786 (1)
  • Ensembl(GRCz10):ENSDARG00000020237 (1)
  • ORTHOLOGY for mc1r (Chr: 18)
    CITATIONS (28)