ZFIN ID: ZDB-GENE-030427-1
Gene Name: contactin 1a
Gene Symbol: cntn1a    Nomenclature History

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Previous Names: cntn1, F3

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 25 Mapping Details/Browsers
Description: Predicted to be involved in cell adhesion and neuron projection development. Predicted to localize to the anchored component of membrane and plasma membrane. Human ortholog(s) of this gene implicated in Compton-North congenital myopathy. Is expressed in heart; musculature system; and nervous system. Orthologous to human CNTN1 (contactin 1).
Genome Resources: Alliance (1),  Gene:353150 (1),  Ensembl(GRCz11):ENSDARG00000087843 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
nub8 Small Deletion Exon 3 Unknown ENU
nub9 Small Deletion Exon 3 Unknown TALEN
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
CRISPR1-cntn1a
2
TALEN1-pclaf,cntn1a 1
PHENOTYPE No data available
DISEASE ASSOCIATED WITH cntn1a HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Compton-North congenital myopathy Alliance ?Myopathy, congenital, Compton-North 612540
DISEASE ASSOCIATED WITH cntn1a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cell adhesion (more)
Cellular Component anchored component of membrane (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Domain IPR003598 Immunoglobulin subtype 2
Domain IPR003599 Immunoglobulin subtype
Domain IPR003961 Fibronectin type III
Domain IPR007110 Immunoglobulin-like domain
Domain IPR013098 Immunoglobulin I-set
Domain IPR013151 Immunoglobulin
Homologous_superfamily IPR013783 Immunoglobulin-like fold
Homologous_superfamily IPR036116 Fibronectin type III superfamily
Homologous_superfamily IPR036179 Immunoglobulin-like domain superfamily
Family IPR036992 Contactin-1
TRANSCRIPTS No data available
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM cntn1a No data available
MARKER RELATIONSHIPS
cntn1a Encodes: [EST] cssl:d0231 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_180969 (1) 3399 bp
Genomic GenBank:CABZ01083593 (1) 14198 bp
Polypeptide UniProtKB:A4JYP8 (1) 1032 aa
Sequence Information (all 24)
ORTHOLOGY for cntn1a ( Chr: 25 )
CITATIONS (31)