Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-030408-1
Gene Name: aryl hydrocarbon receptor nuclear translocator-like 1b
Gene Symbol: arntl1b
Previous Names: bmal1b, zfBMAL3 (1)
Location: Chr: 7   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: text only from Ishikawa et al., 2002
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
  unspecified
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Mutant lines: 2 genotypes
Alleles: ct804, la026242Tg, sa1146
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process photoperiodism (more)
Cellular Component transcription factor complex (more)
Molecular Function CONTRIBUTES_TO DNA binding (more)
GO Terms (all 12)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000014 (1)
  • InterPro:IPR001067 (1)
  • InterPro:IPR001610 (1)
  • InterPro:IPR011598 (1)
  • InterPro:IPR013767 (1)
  • PROSITE:PS50112 (1)
  • PROSITE:PS50888 (1)
  • Pfam:PF00010 (1)
  • Pfam:PF00989 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA arntl1b-001 (1) 1869
    arntl1b-002 (1) 2400
    ncRNA arntl1b-003 (1) 1210
    arntl1b-004 (1) 815
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM arntl1b No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    arntl1b Contained in: [BAC] CH211-159M16 (1) (order this)
    arntl1b Encodes: [cDNA] MGC:162117 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_178300 (1) 1869 bp
    Genomic GenBank:CR318647 (1) 174689 bp
    Select Tool
    Polypeptide UniProtKB:E7F4H0 (1) 646 aa
    Sequence Clusters UniGene:40654 (1)
    Sequence Information (all 19)
    OTHER arntl1b GENE PAGES
  • Gene:352935 (1)
  • VEGA:OTTDARG00000027447 (1)
  • Ensembl(Zv9):ENSDARG00000035732 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish arntl1b 7  
    Human ARNTL 11 (11p15)
  • OMIM:602550
  • Gene:406
  • Mouse Arntl 7 ( 59.17 cM)
  • MGI:1096381
  • Gene:11865
  • Orthology Details
    CITATIONS (25)