header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-030219-1
Gene Name: southpaw
Gene Symbol: spaw
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: ndr3 (2), unm s457, unm t30973, unm_s457, unm_t30973

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have cytokine activity; transforming growth factor beta receptor binding activity; and type I activin receptor binding activity. Involved in determination of left/right symmetry;  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
a205 Small Deletion Exon 1 Frameshift CRISPR
s457 Point Mutation Unknown Start Loss ENU
sa177 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa9063 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • t30973 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 31 figures from 20 publications
    Observed in:
    DISEASE ASSOCIATED WITH spaw HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH spaw VIA EXPERIMENTAL MODELS
    Human Disease Fish Conditions Citations
    anxiety disorder zf105Tg/zf105Tg + MO1-spaw standard conditions Facchin et al., 2015
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process determination of left/right asymmetry in lateral mesoderm (more)
    Cellular Component extracellular region (more)
    Molecular Function protein binding (more)
    GO Terms (all 27)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA spaw-201 (1) 1263
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM spaw No data available
    MARKER RELATIONSHIPS
    spawContained in: [BAC] CH211-173B16 (1) (order this)
    spawEncodes: [cDNA] MGC:194178 (1) (order this), MGC:194213 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_180967 (1) 1229bp
    Genomic GenBank:CT033825 (1) 152404bp
    Select Tool
    Polypeptide UniProtKB:F1QX69 (1) 411aa
    Sequence Clusters UniGene:88813 (1)
    Sequence Information (all 14)
    ORTHOLOGY for spaw (Chr: 5)
    CITATIONS (211)