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ZIRC
ZFIN ID: ZDB-GENE-030131-9825
Gene Name: SET and MYND domain containing 1a
Gene Symbol: smyd1a
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: smyd1, sb:cb405, wu:fc09a05

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have metal ion binding activity. Involved in myofibril assembly and thigmotaxis. Localizes to the M band. Is expressed in fin; heart; musculature system; and somite. Orthologous to human  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
mb4 Small Deletion Exon 3 Frameshift, Premature Stop CRISPR
mb5 Small Deletion Exon 3 Frameshift, Premature Stop CRISPR
sa31493 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40615 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH smyd1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH smyd1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process sarcomere organization (more)
    Cellular Component M band (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 7)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA smyd1a-202 (1) 1195
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM smyd1a
    MARKER RELATIONSHIPS
    smyd1a Contained in: [BAC] CH73-64K8 (1) (order this)
    smyd1a Encodes: [EST] cb405 (1) (order this), fc09a05 (order this)
    [cDNA] MGC:77936 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_205540 (1) 1569 bp
    Genomic GenBank:CU929062 (1) 111698 bp
    Select Tool
    Polypeptide UniProtKB:Q6P0R5 (1) 485 aa
    Sequence Clusters UniGene:21307 (1)
    Sequence Information (all 18)
    ORTHOLOGY for smyd1a ( Chr: 5 )
    CITATIONS (32)