ZFIN ID: ZDB-GENE-030131-967
Gene Name: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
Gene Symbol: smarce1
Previous Names: fb33d02, fb54d11, wu:fb33d02 (1), wu:fb54d11 (1)
Location: Chr: 3 Details
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55303]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
  unspecified
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Mutagen Suppliers
sa12524 Point Mutation ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa12565 Point Mutation ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa20071 Point Mutation ENU
    Targeting reagents: MO1-smarce1 (1)
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH smarce1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    familial meningioma {Meningioma, familial, susceptibility to} 607174
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ATP-dependent chromatin remodeling (more)
    Cellular Component SWI/SNF complex (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR009071 (1)
  • InterPro:IPR030089 (1)
  • PROSITE:PS50118 (1)
  • Pfam:PF00505 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA smarce1-001 (1) 2072
    GENE PRODUCT DESCRIPTION
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM smarce1 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    smarce1Contained in: [BAC] DKEY-15H19 (1) (order this)
    smarce1Encodes: [EST] fb33d02, fb54d11
    [cDNA] MGC:55303 (1) (order this), MGC:77275 (1) (order this), MGC:191900 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201298 (1) 2062bp
    Genomic GenBank:BX890590 (1) 141661bp
    Select Tool
    Polypeptide UniProtKB:F1Q5P8 (1) 424aa
    Sequence Clusters UniGene:75920 (1)
    Sequence Information (all 26)
    OTHER smarce1 GENE PAGES
  • Gene:322248 (1)
  • VEGA:OTTDARG00000020074 (1)
  • Ensembl(GRCz10):ENSDARG00000016871 (1)
  • ORTHOLOGY for smarce1 (Chr: 3)
    Species Symbol Chromosome Accession # Evidence
    Human SMARCE1 17
  • Gene:6605
  • OMIM:603111
  • HGNC:11109
  • Amino acid sequence comparison (2)
    Conserved genome location (synteny) (2)
    Mouse Smarce1 11
  • MGI:1927347
  • Gene:57376
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (17)