ZFIN ID: ZDB-GENE-030131-9634
Gene Name: coagulation factor XIII, A1 polypeptide b
Gene Symbol: f13a1b
Sequence Ontology ID : SO:0000704

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Previous Names: f13a1, fo83d04, FX111a-87 (1), wu:fo83d04, zgc:153334

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from Deasey et al., 2012
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa40835 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH f13a1b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    factor XIII deficiency Factor XIIIA deficiency 613225
    thrombophilia {Venous thrombosis, protection against} 188050
    {Myocardial infarction, protection against} 608446
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process blood coagulation, fibrin clot formation (more)
    Cellular Component cellular_component (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001102 (1)
  • InterPro:IPR002931 (1)
  • InterPro:IPR008958 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR014756 (1)
  • InterPro:IPR023608 (1)
  • InterPro:IPR034810 (1)
  • InterPro:IPR036238 (1)
  • InterPro:IPR036985 (1)
  • Pfam:PF00868 (1)
  • Pfam:PF00927 (1)
  • Pfam:PF01841 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA f13a1b-001 (1) 3162
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM f13a1b No data available
    MARKER RELATIONSHIPS
    f13a1bContained in: [BAC] DKEY-185M8 (1) (order this), DKEYP-32G11 (1)
    f13a1bEncodes: [EST] fo83d04
    [cDNA] MGC:153334 (1) (order this), MGC:192746 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077154 (1) 2589bp
    Genomic GenBank:BX004828 (1) 161870bp
    Select Tool
    Polypeptide UniProtKB:F1R1R7 (1) 742aa
    Sequence Clusters UniGene:16206 (1)
    Sequence Information (all 20)
    OTHER f13a1b GENE PAGES
  • Alliance (1)
  • Gene:561287 (1)
  • VEGA:OTTDARG00000035389 (1)
  • Ensembl(GRCz10):ENSDARG00000036893 (1)
  • ORTHOLOGY for f13a1b (Chr: 7)
    CITATIONS (18)