ZFIN ID: ZDB-GENE-030131-9634
Gene Name: coagulation factor XIII, A1 polypeptide b
Gene Symbol: f13a1b    Nomenclature History

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Previous Names: f13a1, fo83d04, FX111a-87 (1), wu:fo83d04, zgc:153334

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to have protein-glutamine gamma-glutamyltransferase activity. Predicted to be involved in blood coagulation, fibrin clot formation and peptide cross-linking. Is expressed in pectoral fin and retina. Human ortholog(s) of this gene implicated in artery disease (multiple); factor XIII deficiency; priapism; and thrombophilia (multiple). Orthologous to human F13A1 (coagulation factor XIII A chain).
Genome Resources: Alliance (1),  Gene:561287 (1),  Ensembl(GRCz11):ENSDARG00000036893 (2)
GENE EXPRESSION
All Expression Data: 5 figures from 3 publications
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa40835 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH f13a1b HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    factor XIII deficiency Alliance Factor XIIIA deficiency 613225
    thrombophilia Alliance {Venous thrombosis, protection against} 188050
    {Myocardial infarction, protection against} 608446
    DISEASE ASSOCIATED WITH f13a1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process blood coagulation, fibrin clot formation (more)
    Cellular Component cellular_component (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA f13a1b-202 (1)    Ensembl 3162
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM f13a1b No data available
    MARKER RELATIONSHIPS
    f13a1b Contained in: [BAC] DKEY-185M8 (1) (order this), DKEYP-32G11 (1)
    f13a1b Encodes: [EST] fo83d04
    [cDNA] MGC:153334 (1), MGC:192746 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001077154 (1) 2589 nt
    Genomic GenBank:BX004828 (1) 161870 nt
    Select Tool
    Polypeptide UniProtKB:F1R1R7 (1) 742 aa
    Sequence Information (all 19)
    ORTHOLOGY for f13a1b ( Chr: 7 )
    CITATIONS (26)