ZFIN ID: ZDB-GENE-030131-9634
Gene Name: coagulation factor XIII, A1 polypeptide b
Gene Symbol: f13a1b
Previous Names: f13a1, fo83d04, FX111a-87 (1), wu:fo83d04, zgc:153334
Location: Chr: 7   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from Deasey et al., 2011
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Adult (90d-730d, breeding adult)
  pectoral fin, whole organism
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH f13a1b HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
factor XIII deficiency Factor XIIIA deficiency 613225
myocardial infarction {Myocardial infarction, protection against} 608446
thrombophilia {Venous thrombosis, protection against} 188050
GENE ONTOLOGY
Ontology GO Term
Biological Process peptide cross-linking (more)
Cellular Component cellular_component (more)
Molecular Function protein-glutamine gamma-glutamyltransferase activity (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001102 (1)
  • InterPro:IPR002931 (1)
  • InterPro:IPR008958 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR014756 (1)
  • InterPro:IPR023608 (1)
  • Pfam:PF00868 (1)
  • Pfam:PF00927 (1)
  • Pfam:PF01841 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA f13a1b-001 (1) 3162
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM f13a1b No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    f13a1b Contained in: [BAC] DKEY-185M8 (1) (order this), DKEYP-32G11 (1)
    f13a1b Encodes: [EST] fo83d04
    [cDNA] MGC:153334 (1) (order this), MGC:192746 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077154 (1) 2589 bp
    Genomic GenBank:BX004828 (1) 161870 bp
    Select Tool
    Polypeptide UniProtKB:F1R1R7 (1) 742 aa
    Sequence Clusters UniGene:16206 (1)
    Sequence Information (all 17)
    OTHER f13a1b GENE PAGES
  • Gene:561287 (1)
  • VEGA:OTTDARG00000035389 (1)
  • Ensembl(Zv9):ENSDARG00000036893 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA
    Zebrafish f13a1b 7  
    Human F13A1 6 (6p25.3-p24.3)
  • OMIM:134570
  • Gene:2162
  • Orthology Details
    CITATIONS (14)