ZFIN ID: ZDB-GENE-030131-9634
Gene Name: coagulation factor XIII, A1 polypeptide b
Gene Symbol: f13a1b
Sequence Ontology ID : SO:0000704

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Previous Names: f13a1, fo83d04, FX111a-87 (1), wu:fo83d04, zgc:153334

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from Deasey et al., 2011
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Adult (90d-730d, breeding adult)
  pectoral fin, whole organism
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa40835 Point Mutation Unknown Premature Stop ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH f13a1b HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
factor XIII deficiency Factor XIIIA deficiency 613225
thrombophilia {Venous thrombosis, protection against} 188050
{Myocardial infarction, protection against} 608446
GENE ONTOLOGY
Ontology GO Term
Biological Process blood coagulation, fibrin clot formation (more)
Cellular Component cellular_component (more)
Molecular Function protein-glutamine gamma-glutamyltransferase activity (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001102
  • InterPro:IPR002931
  • InterPro:IPR008958
  • InterPro:IPR013783
  • InterPro:IPR014756
  • InterPro:IPR023608
  • InterPro:IPR034810
  • Pfam:PF00868
  • Pfam:PF00927
  • Pfam:PF01841
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA f13a1b-001 (1) 3162
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM f13a1b No data available
    MARKER RELATIONSHIPS
    f13a1bContained in: [BAC] DKEY-185M8 (1) (order this), DKEYP-32G11 (1)
    f13a1bEncodes: [EST] fo83d04
    [cDNA] MGC:153334 (1) (order this), MGC:192746 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077154 (1) 2589bp
    Genomic GenBank:BX004828 (1) 161870bp
    Select Tool
    Polypeptide UniProtKB:F1R1R7 742aa
    Sequence Clusters UniGene:16206 (1)
    Sequence Information (all 20)
    OTHER f13a1b GENE PAGES
  • Alliance (1)
  • Gene:561287 (1)
  • VEGA:OTTDARG00000035389 (1)
  • Ensembl(GRCz10):ENSDARG00000036893 (1)
  • ORTHOLOGY for f13a1b (Chr: 7)
    CITATIONS (15)