ZFIN ID: ZDB-GENE-030131-9396
Gene Name: synergin, gamma
Gene Symbol: synrg    Nomenclature History

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Previous Names: fj67h08, wu:fj67h08 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 15 Mapping Details/Browsers
Description: Orthologous to human SYNRG (synergin gamma).
Genome Resources: Alliance (1),  Gene:555257 (1),  Ensembl(GRCz11):ENSDARG00000073926 (2)
GENE EXPRESSION
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1212 Point Mutation Unknown Splice Site ENU
sa1618 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa22603 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH synrg HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH synrg VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component clathrin coat of trans-Golgi network vesicle (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR000261 EH domain
    Homologous_superfamily IPR011992 EF-hand domain pair
    Family IPR039656 Synergin gamma
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA synrg-201 (1)    Ensembl 5414
    synrg-202 (1)    Ensembl 589
    synrg-203 (1)    Ensembl 725
    synrg-204 (1)    Ensembl 502
    synrg-206 (1)    Ensembl 2188
    ncRNA synrg-002 (1) 618
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM synrg No data available
    MARKER RELATIONSHIPS
    synrg Contained in: [BAC] CH73-337H16 (1), CH211-33E4 (1)
    synrg Encodes: [EST] fj67h08
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_005157439 (1) 5004 bp
    Genomic GenBank:CR450717 (1) 161630 bp
    Select Tool
    Polypeptide UniProtKB:E7F371 (1) 1409 aa
    Sequence Information (all 41)
    ORTHOLOGY for synrg ( Chr: 15 )
    CITATIONS (16)