ZFIN ID: ZDB-GENE-030131-9358
Gene Name: branched chain amino-acid transaminase 1, cytosolic
Gene Symbol: bcat1    Nomenclature History

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Previous Names: fj66g02, wu:fj66g02, zgc:73157

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 4 Mapping Details/Browsers
Description: Predicted to have branched-chain-amino-acid transaminase activity. Predicted to be involved in leucine biosynthetic process and valine biosynthetic process. Predicted to localize to mitochondrion. Is expressed in central nervous system; liver; and neural tube. Orthologous to human BCAT1 (branched chain amino acid transaminase 1).
Genome Resources: Alliance (1),  Gene:337412 (1),  Ensembl(GRCz11):ENSDARG00000045568 (2)
GENE EXPRESSION
All Expression Data: 8 figures from 4 publications
Directly Submitted Expression Data: 4 figures (3 images) from Thisse et al., 2004 [MGC:73157]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH bcat1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH bcat1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process branched-chain amino acid biosynthetic process (more)
Cellular Component mitochondrion (more)
Molecular Function branched-chain-amino-acid transaminase activity (more)
GO Terms (all 13)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA bcat1-201 (1)    Ensembl 2001
bcat1-202 (1)    Ensembl 780
bcat1-205 (1)    Ensembl 785
ncRNA bcat1-004 (1)    Ensembl 501
bcat1-005 (1)    Ensembl 832
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM bcat1 No data available
MARKER RELATIONSHIPS
bcat1 Contained in: [BAC] DKEY-172O10 (1) (order this)
bcat1 Encodes: [EST] fj66g02
[cDNA] MGC:73157 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_200064 (1) 2014 nt
Genomic GenBank:BX547928 (1) 228177 nt Blast at MegaBLAST
Polypeptide UniProtKB:Q5RHB8 (1) 385 aa
Sequence Information (all 16)
ORTHOLOGY for bcat1 ( Chr: 4 )
CITATIONS (28)