ZFIN ID: ZDB-GENE-030131-904
Gene Name: NDC80 kinetochore complex component
Gene Symbol: ndc80
Sequence Ontology ID : SO:0000704

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Previous Names: HEC (highly expressed in cancer) (1), kntc2l (1), wu:fb52e02, zgc:111801

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(Including Attributions)
Location: Chr: 12 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (10 images) from Thisse et al., 2004 [MGC:111801]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi2080Tg Transgenic Insertion Unknown Unknown DNA
hi2857Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa1896 Point Mutation Unknown Splice Site ENU
    sa14319 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16762 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa22044 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38875 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa41971 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE
    Data: 3 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH ndc80 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ndc80 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process attachment of mitotic spindle microtubules to kinetochore (more)
    Cellular Component condensed chromosome kinetochore (more)
    Molecular Function structural constituent of cytoskeleton (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR005550 (1)
  • InterPro:IPR038273 (1)
  • Pfam:PF03801 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ndc80-001 (1) 2310
    ndc80-002 (1) 684
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ndc80 No data available
    MARKER RELATIONSHIPS
    ndc80Contained in: [BAC] CH211-250B22 (1) (order this)
    ndc80Contains: [STS] chunp30189, chunp30327
    ndc80Encodes: [EST] fb52e02
    [cDNA] MGC:111801 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001003863 (1) 2280bp
    Genomic GenBank:CR848037 (1) 101727bp
    Select Tool
    Polypeptide UniProtKB:Q6DRJ7 (1) 632aa
    Sequence Clusters UniGene:77027 (1)
    Sequence Information (all 17)
    OTHER ndc80 GENE PAGES
  • Alliance (1)
  • Gene:445386 (1)
  • VEGA:OTTDARG00000027341 (1)
  • Ensembl(GRCz11):ENSDARG00000071694 (2)
  • ORTHOLOGY for ndc80 (Chr: 12)
    CITATIONS (29)