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ZIRC
ZFIN ID: ZDB-GENE-030131-9033
Gene Name: paired related homeobox 1b
Gene Symbol: prrx1b
Sequence Ontology ID : SO:0000704

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Previous Names: phox1 (1), fa97b09, wu:fa97b09, zgc:64199

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have sequence-specific DNA binding activity; involved in cranial skeletal system development and positive regulation of gene expression; predicted to localize to the nucleus; orthologous  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
b1247 Small Deletion Unknown Frameshift, Premature Stop CRISPR
el491 Insertion Unknown Frameshift, Premature Stop TALEN
sa37097 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH prrx1b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    agnathia-otocephaly complex Agnathia-otocephaly complex 202650
    DISEASE ASSOCIATED WITH prrx1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cranial skeletal system development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 7)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA prrx1b-201 (1) 2766
    prrx1b-202 (1) 943
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM prrx1b
    MARKER RELATIONSHIPS
    prrx1bContained in: [BAC] CH211-214D2 (1) (order this)
    prrx1bEncodes: [EST] fa97b09
    [cDNA] MGC:64199 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200050 (1) 2818bp
    Genomic GenBank:CU571309 (1) 108092bp
    Select Tool
    Polypeptide UniProtKB:Q6P295 (1) 245aa
    Sequence Clusters UniGene:76340 (1)
    Sequence Information (all 16)
    ORTHOLOGY for prrx1b (Chr: 20)
    CITATIONS (27)