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ZIRC
ZFIN ID: ZDB-GENE-030131-9021
Gene Name: syndecan 3
Gene Symbol: sdc3    Nomenclature History

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Previous Name: wu:fa97a01

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Involved in epiboly involved in gastrulation with mouth forming second. Predicted to localize to the integral component of membrane. Human ortholog(s) of this gene implicated in obesity. Is expressed in diencephalon; epiphysis; posterior lateral line primordium; and ventral telencephalon. Orthologous to human SDC3 (syndecan 3).
Genome Resources: Alliance (1),  Gene:337077 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la028063Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-sdc3 N/A 1
    MO2-sdc3 N/A 1
    DISEASE ASSOCIATED WITH sdc3 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    obesity Alliance {Obesity, association with} 601665
    DISEASE ASSOCIATED WITH sdc3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process epiboly involved in gastrulation with mouth forming second (more)
    Cellular Component integral component of membrane (more)
    GO Terms (all 3)
    TRANSCRIPTS No data available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM sdc3 No data available
    MARKER RELATIONSHIPS
    sdc3 Encodes: [EST] fa97a01
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_001919721 (1)
    Genomic GenBank:CABZ01080702 (1) 35634 bp
    Select Tool
    Polypeptide UniProtKB:F1DFN3 (1) 402 aa
    Sequence Clusters UniGene:162030 (1)
    Sequence Information (all 13)
    ORTHOLOGY for sdc3 ( Chr: 19 )
    CITATIONS (19)