Gene

si:ch211-160d20.3

ID

ZDB-GENE-030131-8906

Name

si:ch211-160d20.3

Symbol

si:ch211-160d20.3 Nomenclature History

Previous Names

fk35b03
wu:fk35b03
zgc:136299

Type

protein_coding_gene

Location

Chr: 18 Mapping Details/Browsers

Description

Orthologous to human C19orf47 (chromosome 19 open reading frame 47).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With si:ch211-160d20.3 Human Ortholog

No data available

Associated With si:ch211-160d20.3 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR040772	C19orf47, SAM domain
Domain	IPR041477	Domain of unknown function DUF5577
Family	IPR039161	Uncharacterized protein C19orf47-like
Homologous_superfamily	IPR013761	Sterile alpha motif/pointed domain superfamily

Domain Details Per Protein

Protein	Length	C19orf47, SAM domain	Domain of unknown function DUF5577	Sterile alpha motif/pointed domain superfamily	Uncharacterized protein C19orf47-like
UniProtKB:A0A8M3B324 InterPro	354
UniProtKB:Q1JQ47 InterPro	392

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	si:ch211-160d20.3-201 (1) Ensembl	Havana	1734 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	si:ch211-160d20.3-202 (1) Ensembl	Havana	513 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations