ZFIN ID: ZDB-GENE-030131-8832
Gene Name: sushi domain containing 6
Gene Symbol: susd6    Nomenclature History

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Previous Names: fk24g06, si:dkey-11e23.5, wu:fk24g06, zgc:154022

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 20 Mapping Details/Browsers
Description: Predicted to localize to the integral component of membrane. Orthologous to human SUSD6 (sushi domain containing 6).
Genome Resources: Alliance (1),  Gene:336888 (1),  Ensembl(GRCz11):ENSDARG00000030116 (2)
GENE EXPRESSION
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la013843Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa8975 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa11637 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37055 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45703 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • ws22932Tg Transgenic Insertion Unknown Unknown DNA
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH susd6 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH susd6 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component integral component of membrane (more)
    Molecular Function molecular_function (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR000436 Sushi/SCR/CCP domain
    Homologous_superfamily IPR035976 Sushi/SCR/CCP superfamily
    Family IPR042866 Sushi domain-containing protein 6
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA susd6-201 (1)    Ensembl 4966
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM susd6 No data available
    MARKER RELATIONSHIPS
    susd6 Contained in: [BAC] DKEY-11E23 (1) (order this)
    susd6 Encodes: [EST] fk24g06
    [cDNA] MGC:154022 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001044755 (1) 2081 bp
    Genomic GenBank:AL928866 (1) 249759 bp Blast at MegaBLAST
    Polypeptide UniProtKB:U3JAN2 (1) 364 aa
    Sequence Information (all 18)
    ORTHOLOGY for susd6 ( Chr: 20 )
    CITATIONS (24)