ZFIN ID: ZDB-GENE-030131-8743
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Gene Name: superoxide dismutase 3, extracellular b
Gene Symbol: sod3b
Previous Names: sod3, fb05f10, si:dkey-117m1.6, wu:fb05f10 (1)
Location: Chr: 1 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
  whole organism
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH sod3b HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
[Superoxide dismutase, elevated extracellular]
GENE ONTOLOGY
Ontology GO Term
Biological Process oxidation-reduction process (more)
Cellular Component cytoplasm (more)
Molecular Function metal ion binding (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001424 (1)
  • InterPro:IPR018152 (1)
  • InterPro:IPR024134 (1)
    		•
  • PROSITE:PS00087 (1)
  • PROSITE:PS00332 (1)
    		•
  • Pfam:PF00080 (1)
    		•
  • EC:1.15.1.1 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ottdart00000061559 (1) 1218
    Select Tool
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sod3b No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    sod3bContained in: [BAC] CH211-261D5 (1) (order this), DKEY-117M1 (1) (order this)
    sod3bEncodes: [EST] fb05f10
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_001332722 (1) 1231bp
    Select Tool
    Genomic GenBank:CR847546 (1) 147811bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IWT0 (1) 197aa
    Select Tool
    Sequence Clusters UniGene:155460 (1)
    Sequence Information (all 17)
    OTHER sod3b GENE PAGES
  • Gene:794006 (1)
  • VEGA:OTTDARG00000042615 (1)
  • Ensembl(GRCz10):ENSDARG00000079183 (1)
    • ORTHOLOGY for sod3b (Chr: 1)
    Species Symbol Chromosome Accession # Evidence
    Human SOD3 4
  • Gene:6649
  • OMIM:185490
  • HGNC:11181
    		•  Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Mouse Sod3 5
  • MGI:103181
  • Gene:20657
    		•  Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (14)