ZFIN ID: ZDB-GENE-030131-8743
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.
Please check the highlighted fields and try again.
Thank you for submitting comments. Your input has been emailed to ZFIN curators who may contact you if additional information is required.
Oops. Something went wrong. Please try again later.
Gene Name: superoxide dismutase 3, extracellular b
Gene Symbol: sod3b
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: sod3, fb05f10, si:dkey-117m1.6, wu:fb05f10 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 1 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH sod3b HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
[Superoxide dismutase, elevated extracellular]
DISEASE ASSOCIATED WITH sod3b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process oxidation-reduction process (more)
Cellular Component cytoplasm (more)
Molecular Function metal ion binding (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001424 (1)
  • InterPro:IPR018152 (1)
  • InterPro:IPR024134 (1)
  • InterPro:IPR036423 (1)
    		•
  • PROSITE:PS00087 (1)
  • PROSITE:PS00332 (1)
    		•
  • Pfam:PF00080 (1)
    		•
  • EC:1.15.1.1 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ottdart00000061559 (1) 1218
    Select Tool
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sod3b No data available
    MARKER RELATIONSHIPS
    sod3bContained in: [BAC] CH211-261D5 (1) (order this), DKEY-117M1 (1) (order this)
    sod3bEncodes: [EST] fb05f10
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_001332722 (1) 1283bp
    Select Tool
    Genomic GenBank:CR847546 (1) 147811bp
    Select Tool
    Polypeptide UniProtKB:E9QIM2 (1) 192aa
    Select Tool
    Sequence Clusters UniGene:155460 (1)
    Sequence Information (all 15)
    OTHER sod3b GENE PAGES
  • Alliance (1)
  • Gene:794006 (1)
  • VEGA:OTTDARG00000042615 (1)
  • Ensembl(GRCz11):ENSDARG00000079183 (1)
    • ORTHOLOGY for sod3b (Chr: 1)
    CITATIONS (19)