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General Information
ZIRC
ZFIN ID: ZDB-GENE-030131-8730
Gene Name: proteasome 26S subunit, ATPase 1a
Gene Symbol: psmc1a
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: psmc1, wu:fb05d04

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(Including Attributions)
Location: Chr: 17 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have TBP-class protein binding activity and proteasome-activating ATPase activity. Predicted to be involved in protein catabolic process. Predicted to localize to the proteasome  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7145353]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la013187Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa10453 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH psmc1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH psmc1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein catabolic process (more)
    Cellular Component cytoplasm (more)
    Molecular Function ATP binding (more)
    GO Terms (all 13)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA psmc1a-201 (1) 2248
    psmc1a-202 (1) 589
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM psmc1a No data available
    MARKER RELATIONSHIPS
    psmc1aContained in: [BAC] DKEY-178F2 (1) (order this), RP71-40N14 (1) (order this)
    psmc1aEncodes: [EST] fb05d04, IMAGE:7145353 (1) (order this)
    [cDNA] MGC:56516 (1) (order this), MGC:174545 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200033 (1) 1749bp
    Genomic GenBank:BX323450 (1) 178920bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IFE2 (1) 483aa
    Sequence Clusters UniGene:76288 (1)
    Sequence Information (all 20)
    ORTHOLOGY for psmc1a (Chr: 17)
    CITATIONS (25)