Gene

rnf38

ID

ZDB-GENE-030131-8693

Name

ring finger protein 38

Symbol

rnf38 Nomenclature History

Previous Names

fa94e11
si:dkey-20n3.1
wu:fa94e11 (1)

Type

protein_coding_gene

Location

Chr: 1 Mapping Details/Browsers

Description

Predicted to have metal ion binding activity. Orthologous to human RNF38 (ring finger protein 38).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With rnf38 Human Ortholog

No data available

Associated With rnf38 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001841	Zinc finger, RING-type
Homologous_superfamily	IPR013083	Zinc finger, RING/FYVE/PHD-type

Domain Details Per Protein

Protein	Length	Zinc finger, RING/FYVE/PHD-type	Zinc finger, RING-type
UniProtKB:A0A8M9QE71 InterPro	676
UniProtKB:E7FDX7 InterPro	673

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	rnf38-201 (1) Ensembl	Ensembl	2,825 nt	Select Tool
mRNA	rnf38-202 (1) Ensembl	Ensembl	1,986 nt	Select Tool ZFIN BLAST
mRNA	rnf38-203 (1) Ensembl	Ensembl	1,416 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations