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ZIRC
ZFIN ID: ZDB-GENE-030131-8680
Gene Name: COP9 constitutive photomorphogenic homolog subunit 7A
Gene Symbol: cops7a
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fa19h06, wu:fa94b04

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in COP9 signalosome assembly. Predicted to localize to the COP9 signalosome. Orthologous to several human genes including COPS7A (COP9 signalosome subunit 7A).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6907325]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH cops7a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH cops7a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process COP9 signalosome assembly (more)
Cellular Component COP9 signalosome (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000717 (1)
  • InterPro:IPR041481 (1)
  • PROSITE:PS50250 (1)
  • Pfam:PF01399 (1)
  • Pfam:PF18392 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cops7a-201 (1) 1196
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cops7a No data available
    MARKER RELATIONSHIPS
    cops7aContained in: [BAC] CH73-86N18 (1) (order this), CH211-154O6 (1) (order this)
    cops7aEncodes: [EST] fa19h06, fa94b04, IMAGE:6907325 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001305596 (1)
    Genomic GenBank:BX294670 199070bp
    Select Tool
    Polypeptide UniProtKB:Q1LXQ3 (1) 293aa
    Sequence Clusters UniGene:11003 (1)
    Sequence Information (all 19)
    ORTHOLOGY for cops7a (Chr: 16)
    CITATIONS (15)