ZFIN ID: ZDB-GENE-030131-866
Gene Name: farnesyltransferase, CAAX box, alpha
Gene Symbol: fnta
Sequence Ontology ID : SO:0000704

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Previous Names: im:6909421, wu:fb51d12, wu:fz92f09, zgc:158397

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(Including Attributions)
Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6909421]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa33494 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH fnta HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH fnta VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein prenylation (more)
    Cellular Component CAAX-protein geranylgeranyltransferase complex (more)
    Molecular Function protein prenyltransferase activity (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002088 (1)
  • PROSITE:PS51147 (1)
  • Pfam:PF01239 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA fnta-001 (1) 1037
    ncRNA fnta-002 (1) 1253
    mRNA fnta-003 (1) 327
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM fnta No data available
    MARKER RELATIONSHIPS
    fntaContained in: [BAC] CH73-370D1 (1) (order this)
    fntaContains: [SNP] rs3728619 (1)
    fntaEncodes: [EST] fb51d12, fz92f09, IMAGE:6909421 (1) (order this)
    [cDNA] MGC:158397 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080560 (1) 1657bp
    Genomic GenBank:FP102983 (1) 91094bp
    Select Tool
    Polypeptide UniProtKB:A1L1V1 (1) 374aa
    Sequence Clusters UniGene:36981 (1)
    Sequence Information (all 19)
    OTHER fnta GENE PAGES
  • Alliance (1)
  • Gene:555882 (1)
  • VEGA:OTTDARG00000042064 (1)
  • Ensembl(GRCz11):ENSDARG00000099143 (1)
  • ORTHOLOGY for fnta (Chr: 14)
    CITATIONS (19)