Gene

rpl7

ID

ZDB-GENE-030131-8654

Name

ribosomal protein L7

Symbol

rpl7 Nomenclature History

Previous Names

bb02h10
mg:bb02h10
wu:fa93c11

Type

protein_coding_gene

Location

Chr: 2 Mapping Details/Browsers

Description

Is predicted to enable RNA binding activity. Is predicted to be a structural constituent of ribosome. Involved in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Acts upstream of or within regulation of cell cycle. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Orthologous to human RPL7 (ribosomal protein L7).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UCSC scRNA-seq

Single Cell Expression Atlas

Thisse Expression Data

IMAGE:6902943 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 4 figures from 4 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With rpl7 Human Ortholog

No data available

Associated With rpl7 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR018038	Ribosomal protein L30, conserved site
Domain	IPR012988	Ribosomal protein L30, N-terminal
Domain	IPR016082	Ribosomal protein L30, ferredoxin-like fold domain
Domain	IPR035808	Ribosomal protein L7, eukaryotic/archaeal
Family	IPR005998	Ribosomal protein L7, eukaryotic
Family	IPR039699	Ribosomal protein L7/L30
Homologous_superfamily	IPR036919	Ribosomal protein L30, ferredoxin-like fold domain superfamily

Domain Details Per Protein

Protein	Length	Ribosomal protein L30, conserved site	Ribosomal protein L30, ferredoxin-like fold domain	Ribosomal protein L30, ferredoxin-like fold domain superfamily	Ribosomal protein L30, N-terminal	Ribosomal protein L7, eukaryotic	Ribosomal protein L7, eukaryotic/archaeal	Ribosomal protein L7/L30
UniProtKB:Q3B7P9 InterPro	246
UniProtKB:Q6Q417 InterPro	246
UniProtKB:Q5RKN1 InterPro	246
UniProtKB:A8WGL4 InterPro	246

Transcripts

Genome Browsers

Type	Name	Length (nt)	Analysis
mRNA	rpl7-201 (1) Ensembl	846 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	rpl7-002 (1) Ensembl	494 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations