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ZIRC
ZFIN ID: ZDB-GENE-030131-858
Gene Name: syntaxin 6
Gene Symbol: stx6    Nomenclature History

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Previous Names: fb51b08, si:dkey-121a11.2, wu:fb51b08 (1), zgc:110658

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 22 Mapping Details/Browsers
Description: Predicted to have SNAP receptor activity and SNARE binding activity. Predicted to be involved in several processes, including retrograde transport, endosome to Golgi; vesicle docking; and vesicle fusion. Predicted to localize to the SNARE complex and integral component of synaptic vesicle membrane. Orthologous to human STX6 (syntaxin 6).
Genome Resources: Alliance (1),  Gene:550577 (1),  Ensembl(GRCz11):ENSDARG00000042742 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7149204]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la014169Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la022198Tg Transgenic Insertion Unknown Unknown DNA
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH stx6 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH stx6 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process Golgi vesicle transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function SNAP receptor activity (more)
    GO Terms (all 14)
    Browsers: NCBI
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM stx6 No data available
    MARKER RELATIONSHIPS
    stx6 Contained in: [BAC] CH211-135J1 (1) (order this), DKEY-121A11 (1) (order this)
    stx6 Encodes: [EST] fb51b08, IMAGE:7149204 (1) (order this)
    [cDNA] MGC:110658 (1) (order this), MGC:173676 (1) (order this), MGC:192591 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001017879 (1) 1381 bp
    Genomic GenBank:BX465190 (1) 183103 bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8RKH5 (1) 256 aa
    Sequence Clusters UniGene:75422 (1)
    Sequence Information (all 23)
    ORTHOLOGY for stx6 ( Chr: 22 )
    CITATIONS (23)