ZFIN ID: ZDB-GENE-030131-858
Gene Name: syntaxin 6
Gene Symbol: stx6
Sequence Ontology ID : SO:0000704

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Previous Names: fb51b08, si:dkey-121a11.2, wu:fb51b08 (1), zgc:110658

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(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have SNAP receptor activity and SNARE binding activity; predicted to be involved in several processes, including intracellular protein transport, retrograde transport, endosome to Golgi,  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7149204]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la014169Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la022198Tg Transgenic Insertion Unknown Unknown DNA
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH stx6 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH stx6 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process Golgi vesicle transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function SNAP receptor activity (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000727 (1)
  • InterPro:IPR006012 (1)
  • InterPro:IPR010989 (1)
  • InterPro:IPR015260 (1)
  • PROSITE:PS00914 (1)
  • PROSITE:PS50192 (1)
  • Pfam:PF05739 (1)
  • Pfam:PF09177 (1)
  •  Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM stx6 No data available
    MARKER RELATIONSHIPS
    stx6Contained in: [BAC] CH211-135J1 (1) (order this), DKEY-121A11 (1) (order this)
    stx6Encodes: [EST] fb51b08, IMAGE:7149204 (1) (order this)
    [cDNA] MGC:110658 (1) (order this), MGC:173676 (1) (order this), MGC:192591 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001017879 (1) 1381bp
    Genomic GenBank:BX465190 (1) 183103bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8RKH5 (1) 256aa
    Sequence Clusters UniGene:75422 (1)
    Sequence Information (all 23)
    OTHER stx6 GENE PAGES
  • Alliance (1)
  • Gene:550577 (1)
  • ORTHOLOGY for stx6 (Chr: 22)
    CITATIONS (21)