ZFIN ID: ZDB-GENE-030131-8494
Gene Name: ribosomal protein S3
Gene Symbol: rps3    Nomenclature History

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Previous Names: fb13d09, wu:fb13d09, zgc:56088 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 18 Mapping Details/Browsers
Description: Predicted to have DNA-(apurinic or apyrimidinic site) endonuclease activity; oxidized purine DNA binding activity; and oxidized purine nucleobase lesion DNA N-glycosylase activity. Involved in chordate embryonic development and erythrocyte differentiation. Predicted to localize to the cytosolic small ribosomal subunit and nucleus. Orthologous to human RPS3 (ribosomal protein S3).
Genome Resources: Alliance (1),  Gene:336550 (1),  Ensembl(GRCz11):ENSDARG00000103007 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56088]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-rps3 N/A 2
DISEASE ASSOCIATED WITH rps3 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH rps3 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process chordate embryonic development (more)
Cellular Component ribosome (more)
Molecular Function RNA binding (more)
GO Terms (all 13)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Conserved_site IPR018280 Ribosomal protein S3, conserved site
Domain IPR001351 Ribosomal protein S3, C-terminal
Domain IPR004044 K Homology domain, type 2
Family IPR005703 Ribosomal protein S3, eukaryotic/archaeal
Homologous_superfamily IPR009019 K homology domain superfamily, prokaryotic type
Homologous_superfamily IPR015946 K homology domain-like, alpha/beta
Homologous_superfamily IPR036419 Ribosomal protein S3, C-terminal domain superfamily
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA rps3-002 (1) 983
rps3-201 (1)    Ensembl 851
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM rps3 No data available
MARKER RELATIONSHIPS
rps3 Contained in: [BAC] CH73-39G20 (1)
rps3 Encodes: [EST] fb13d09
[cDNA] MGC:56088 (1), MGC:192274 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_201153 (1) 850 nt
Genomic GenBank:CU570791 (1) 141786 nt
Select Tool
Polypeptide UniProtKB:Q6TLG8 (1) 245 aa
Sequence Information (all 18)
ORTHOLOGY for rps3 ( Chr: 18 )
CITATIONS (26)