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ZIRC
ZFIN ID: ZDB-GENE-030131-8470
Gene Name: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5a
Gene Symbol: b3gnt5a    Nomenclature History

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Previous Names: b3gnt5, fb12f12, Lc3 (1), wu:fb12f12, wu:fe50g08

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 11 Mapping Details/Browsers
Description: Predicted to have N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity and acetylgalactosaminyltransferase activity. Predicted to be involved in poly-N-acetyllactosamine biosynthetic process and protein glycosylation. Predicted to localize to the Golgi apparatus and endoplasmic reticulum. Is expressed in solid lens vesicle. Orthologous to human B3GNT5 (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5).
Genome Resources: Alliance (1),  Gene:336526 (1),  Ensembl(GRCz11):ENSDARG00000018971 (2)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Blastula:Dome (4.33h-4.66h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1013 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa17958 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa30943 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH b3gnt5a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH b3gnt5a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein glycosylation (more)
    Cellular Component Golgi apparatus (more)
    Molecular Function galactosyltransferase activity (more)
    GO Terms (all 16)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002659 (1)
  • Pfam:PF01762 (1)
  • EC:2.4.1.206 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA b3gnt5a-201 (1)    Ensembl 2395
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM b3gnt5a No data available
    MARKER RELATIONSHIPS
    b3gnt5a Contained in: [BAC] CH211-89E4 (1) (order this)
    b3gnt5a Encodes: [EST] fb12f12, fe50g08
    [cDNA] MGC:92221 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_198876 (1) 2371 bp
    Genomic GenBank:CT990625 (1) 68611 bp
    Select Tool
    Polypeptide UniProtKB:Q7T3S5 (1) 379 aa
    Sequence Clusters UniGene:76667 (1)
    Sequence Information (all 15)
    ORTHOLOGY for b3gnt5a ( Chr: 11 )
    CITATIONS (26)