Gene

col10a1a

ID
ZDB-GENE-030131-8373
Name
collagen, type X, alpha 1a
Symbol
col10a1a Nomenclature History
Previous Names
  • col10a1
  • fa66d11 (1)
  • wu:fa66d11 (1)
  • wu:fb10c08
Type
protein_coding_gene
Location
Chr: 17 Mapping Details/Browsers
Description
Predicted to be an extracellular matrix structural constituent. Involved in fin regeneration. Predicted to localize to extracellular matrix and extracellular space. Is expressed in several structures, including cranium; fin; osteoblast; osteoprogenitor cell; and skeletal element. Human ortholog(s) of this gene implicated in Schmid metaphyseal chondrodysplasia and osteochondrodysplasia. Orthologous to human COL10A1 (collagen type X alpha 1 chain).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
71 figures from 50 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With col10a1a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Schmid metaphyseal chondrodysplasia Alliance Metaphyseal chondrodysplasia, Schmid type 156500
Associated With col10a1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001073 C1q domain
Homologous_superfamily IPR008983 Tumour necrosis factor-like domain superfamily
Repeat IPR008160 Collagen triple helix repeat
Domain Details Per Protein
Protein Length C1q domain Collagen triple helix repeat Tumour necrosis factor-like domain superfamily
UniProtKB:F1QXD5 655
UniProtKB:A1KXD7 163
UniProtKB:A2RQR3 655
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations