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General Information
ZIRC
ZFIN ID: ZDB-GENE-030131-8373
Gene Name: collagen, type X, alpha 1a
Gene Symbol: col10a1a
Sequence Ontology ID : SO:0000704

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Previous Names: col10a1, fa66d11 (1), wu:fa66d11 (1), wu:fb10c08

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(Including Attributions)
Location: Chr: 17 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have extracellular matrix structural constituent. Involved in fin regeneration. Predicted to localize to the collagen type IV trimer and extracellular space. Human ortholog(s) of this  ...
PHENOTYPE No data available
DISEASE ASSOCIATED WITH col10a1a HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Schmid metaphyseal chondrodysplasia Metaphyseal chondrodysplasia, Schmid type 156500
DISEASE ASSOCIATED WITH col10a1a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process fin regeneration (more)
Cellular Component collagen trimer (more)
Molecular Function extracellular matrix structural constituent (more)
GO Terms (all 8)
TRANSCRIPTS
Type Name Length (bp) Analysis
ncRNA col10a1a-001 (1) 1779
mRNA col10a1a-201 (1) 2639
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYS
ANTIBODIESNo data available
PLASMIDSNo data available
CONSTRUCTS WITH SEQUENCES FROM col10a1a
MARKER RELATIONSHIPS
col10a1aContained in: [BAC] CH211-266G18 (1) (order this)
col10a1aEncodes: [EST] fa66d11, fb10c08
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001083827 (1) 2620bp
Genomic GenBank:CU306817 (1) 176617bp
Select Tool
Polypeptide UniProtKB:A2RQR3 (1) 655aa
Sequence Clusters UniGene:38145 (1)
Sequence Information (all 17)
ORTHOLOGY for col10a1a (Chr: 17)
CITATIONS (91)