ZFIN ID: ZDB-GENE-030131-8210
Gene Name: lysyl oxidase-like 3b
Gene Symbol: loxl3b    Nomenclature History

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Previous Names: fj60c12, im:7157119, wu:fj60c12, zgc:162959

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 13 Mapping Details/Browsers
Description: Predicted to have fibronectin binding activity and protein-lysine 6-oxidase activity. Involved in embryonic viscerocranium morphogenesis. Predicted to localize to cytoplasm; extracellular space; and nucleus. Is expressed in several structures, including axis; cartilage element; mesoderm; pharyngeal arch; and yolk syncytial layer. Orthologous to human LOXL3 (lysyl oxidase like 3).
Genome Resources: Alliance (1),  Gene:336266 (1),  Ensembl(GRCz11):ENSDARG00000039563 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la011137Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la012284Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa14043 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31913 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-loxl3b N/A 2
    MO2-loxl3b N/A 1
    DISEASE ASSOCIATED WITH loxl3b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH loxl3b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process embryonic viscerocranium morphogenesis (more)
    Cellular Component cytoplasm (more)
    Molecular Function fibronectin binding (more)
    GO Terms (all 24)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA loxl3b-201 (1)    Ensembl 1489
    loxl3b-202 (1)    Ensembl 1274
    loxl3b-203 (1)    Ensembl 2607
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM loxl3b No data available
    MARKER RELATIONSHIPS
    loxl3b Contained in: [BAC] CH211-1M7 (1), CH211-195G14 (1)
    loxl3b Encodes: [EST] fj60c12, IMAGE:7140246 (1), IMAGE:7149527 (1), IMAGE:7157119 (1)
    [cDNA] MGC:162959 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001089342 (1) 1505 nt
    Genomic GenBank:BX323842 (1) 162929 nt
    Select Tool
    Polypeptide UniProtKB:B8A4W9 (1) 807 aa
    Sequence Information (all 37)
    ORTHOLOGY for loxl3b ( Chr: 13 )
    CITATIONS (31)