ZFIN ID: ZDB-GENE-030131-8082
Gene Name: zgc:194678
Gene Symbol: zgc:194678    Nomenclature History

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Previous Names: fj51d06, wu:fj51d06 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to localize to integral component of membrane. Orthologous to human VSTM2B (V-set and transmembrane domain containing 2B).
Genome Resources: Alliance (1),  Gene:793103 (1),  Ensembl(GRCz11):ENSDARG00000077940 (2),  Ensembl(GRCz11):ENSDARG00000098810 (1)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa21052 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:194678 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:194678 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component integral component of membrane (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:194678-201 (1)    Ensembl 1603
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:194678 No data available
    MARKER RELATIONSHIPS
    zgc:194678 Contained in: [BAC] CH211-270J21 (1), DKEY-57G18 (1) (order this)
    zgc:194678 Encodes: [EST] fj51d06
    [cDNA] MGC:194678 (1), MGC:194691 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001128778 (1) 1375 nt
    Genomic GenBank:CT954332 (1) 186210 nt
    Select Tool
    Polypeptide UniProtKB:B3DK21 (1) 260 aa
    Sequence Information (all 18)
    ORTHOLOGY for zgc:194678 ( Chr: 7 )
    CITATIONS (16)