ZFIN ID: ZDB-GENE-030131-7887
Gene Name: leucine-rich pentatricopeptide repeat containing
Gene Symbol: lrpprc
Sequence Ontology ID : SO:0000704

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Previous Names: fc13c04, im:7150924, im:7151572, wu:fc13c04, wu:fj38h02

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(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Orthologous to human LRPPRC (leucine rich pentatricopeptide repeat containing).
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (9 images) from Thisse et al., 2004 [IMAGE:7151572]
  6 figures (8 images) from Thisse et al., 2004 [IMAGE:7150924]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7165989]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH lrpprc HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Leigh disease Leigh syndrome, French-Canadian type 220111
DISEASE ASSOCIATED WITH lrpprc VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process RNA modification (more)
Cellular Component mitochondrion (more)
Molecular Function endonuclease activity (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002885 (1)
  • InterPro:IPR011990 (1)
  • InterPro:IPR033490 (1)
  • PROSITE:PS51375 (1)
  • Pfam:PF01535 (1)
  • Pfam:PF12854 (1)
  • Pfam:PF13812 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA lrpprc-001 (1) 4829
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM lrpprc No data available
    MARKER RELATIONSHIPS
    lrpprcContained in: [BAC] CH211-55H24 (1) (order this), CH211-227C6 (1) (order this), DKEY-47M24 (1) (order this)
    lrpprcEncodes: [EST] fc13c04, fj38h02, IMAGE:7150924 (1) (order this), IMAGE:7151572 (1) (order this), IMAGE:7165989 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001142592 (1) 4773bp
    Genomic GenBank:AL928999 (1) 169570bp
    Select Tool
    Polypeptide UniProtKB:F5H8N4 (1) 1461aa
    Sequence Clusters UniGene:27335 (1)
    Sequence Information (all 30)
    OTHER lrpprc GENE PAGES
  • Alliance (1)
  • Gene:557195 (1)
  • VEGA:OTTDARG00000027746 (1)
  • Ensembl(GRCz11):ENSDARG00000043970 (2)
  • ORTHOLOGY for lrpprc (Chr: 13)
    CITATIONS (24)