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General Information
ZIRC
ZFIN ID: ZDB-GENE-030131-780
Gene Name: cadherin 15, type 1, M-cadherin (myotubule)
Gene Symbol: cdh15
Sequence Ontology ID : SO:0000704

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Previous Names: fb48f12, wu:fb48f12

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have several functions, including cadherin binding activity; cytoskeletal protein binding activity; and protein homodimerization activity. Predicted to be involved in several processes,  ...
GENE EXPRESSION
All Expression Data: 13 figures from 6 publications
Directly Submitted Expression Data: 6 figures (10 images) from Thisse et al., 2005 [eu141]
Wild-type Stages, Structures: Segmentation:10-13 somites (14.0h-16.0h) to Larval:Days 7-13 (168.0h-14d, 4.5mm, 8 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la026167Tg Transgenic Insertion Unknown Unknown DNA
la026168Tg Transgenic Insertion Unknown Unknown DNA
sa695 Point Mutation Unknown Splice Site ENU
sa11460 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH cdh15 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    autosomal dominant non-syndromic intellectual disability 3 Mental retardation, autosomal dominant 3 612580
    DISEASE ASSOCIATED WITH cdh15 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell adhesion (more)
    Cellular Component integral component of membrane (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 18)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cdh15-201 (1) 2643
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cdh15
    MARKER RELATIONSHIPS
    cdh15Contained in: [BAC] CH211-245P24 (1) (order this)
    cdh15Encodes: [EST] eu141 (1), fb48f12
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212606 (1) 2436bp
    Genomic GenBank:AL954648 (1) 167007bp
    Select Tool
    Polypeptide UniProtKB:Q6T1F3 (1) 811aa
    Sequence Clusters UniGene:77096 (1)
    Sequence Information (all 13)
    ORTHOLOGY for cdh15 (Chr: 7)
    CITATIONS (30)