ZFIN ID: ZDB-GENE-030131-7782
Gene Name: CCHC-type zinc finger, nucleic acid binding protein b
Gene Symbol: cnbpb    Nomenclature History

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Previous Names: cnbp (1), wu:fj34c03

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 11 Mapping Details/Browsers
Description: Predicted to have mRNA binding activity; single-stranded RNA binding activity; and translation regulator activity. Involved in positive regulation of innate immune response. Predicted to localize to cytoplasm. Human ortholog(s) of this gene implicated in myotonic dystrophy type 2. Orthologous to several human genes including CNBP (CCHC-type zinc finger nucleic acid binding protein).
Genome Resources: Alliance (1),  Gene:335839 (1),  Ensembl(GRCz11):ENSDARG00000070922 (2)
GENE EXPRESSION
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa14937 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cnbpb HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    myotonic dystrophy type 2 Alliance Myotonic dystrophy 2 602668
    DISEASE ASSOCIATED WITH cnbpb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process positive regulation of innate immune response (more)
    Cellular Component cytoplasm (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cnbpb-201 (1)    Ensembl 1746
    cnbpb-202 (1)    Ensembl 1031
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cnbpb No data available
    MARKER RELATIONSHIPS
    cnbpb Contained in: [BAC] CH211-159E12
    cnbpb Encodes: [EST] fj34c03
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001326405 (1)
    Genomic GenBank:CR855375 (1) 178231 nt
    Select Tool
    Polypeptide UniProtKB:E7FCQ0 (1) 161 aa
    Sequence Information (all 8)
    ORTHOLOGY for cnbpb ( Chr: 11 )
    CITATIONS (20)