ZFIN ID: ZDB-GENE-030131-7297
Gene Name: synaptotagmin IV
Gene Symbol: syt4    Nomenclature History

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Previous Names: wu:fj05d11, zgc:73240

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to have several functions, including SNARE binding activity; calcium ion binding activity; and phospholipid binding activity. Predicted to be involved in several processes, including calcium-ion regulated exocytosis; cellular response to calcium ion; and regulation of secretion by cell. Predicted to localize to several cellular components, including axon; exocytic vesicle; and synapse. Is expressed in nervous system and neural tube. Orthologous to human SYT4 (synaptotagmin 4).
Genome Resources: Alliance (1),  Gene:335357 (1),  Ensembl(GRCz11):ENSDARG00000036505 (2)
GENE EXPRESSION
All Expression Data: 8 figures from 3 publications
Directly Submitted Expression Data: 5 figures (7 images) from Thisse et al., 2004 [MGC:73240]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Hatching:Long-pec (48.0h-60.0h)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH syt4 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH syt4 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process exocytosis (more)
Cellular Component integral component of membrane (more)
Molecular Function calcium-dependent phospholipid binding (more)
GO Terms (all 19)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA syt4-201 (1)    Ensembl 2327
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM syt4 No data available
MARKER RELATIONSHIPS
syt4 Contained in: [BAC] DKEY-183C6 (1) (order this)
syt4 Encodes: [EST] fj05d11
[cDNA] MGC:73240 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_199948 (1) 2317 nt
Genomic GenBank:CR388231 (1) 179363 nt
Select Tool
Polypeptide UniProtKB:Q6PBU6 (1) 439 aa
Sequence Information (all 9)
ORTHOLOGY for syt4 ( Chr: 7 )
CITATIONS (25)