ZFIN ID: ZDB-GENE-030131-7291
Gene Name: calcyphosine-like a
Gene Symbol: capsla    Nomenclature History

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Previous Names: capsl, wu:fj05b10, zgc:112473

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity. Is expressed in hypophysis; otic vesicle; pronephric duct; sensory system; and tail bud. Orthologous to human CAPSL (calcyphosine like).
Genome Resources: Alliance (1),  Gene:550371 (1),  Ensembl(GRCz11):ENSDARG00000103521 (1)
GENE EXPRESSION
All Expression Data: 8 figures from 2 publications
Directly Submitted Expression Data: 7 figures (16 images) from Thisse et al., 2004 [MGC:112473]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH capsla HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH capsla VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Molecular Function calcium ion binding (more)
GO Terms (all 1)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Binding_site IPR018247 EF-Hand 1, calcium-binding site
Domain IPR002048 EF-hand domain
Homologous_superfamily IPR011992 EF-hand domain pair
TRANSCRIPTS No data available
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM capsla No data available
MARKER RELATIONSHIPS
capsla Contains: [SNP] rs3727660 (1), rs3727661 (1), rs3727662 (1), rs3727663 (1)
capsla Encodes: [EST] fj05b10
[cDNA] MGC:112473 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001017676 (1)
Genomic GenBank:CABZ01082604 (1)
Polypeptide UniProtKB:A0A0R4IPL6 (1) 188 aa
Sequence Information (all 16)
ORTHOLOGY for capsla ( Chr: 2 )
CITATIONS (18)