ZFIN ID: ZDB-GENE-030131-7172
Gene Name: protein kinase, AMP-activated, beta 1 non-catalytic subunit, b
Gene Symbol: prkab1b    Nomenclature History

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Previous Names: prkab1, etID37891.8 (1), wu:fk93d05, wu:fw87e09, zgc:56652 (1), zgc:76975

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to contribute to AMP-activated protein kinase activity. Predicted to be involved in phosphorylation. Predicted to localize to the cytoplasm; nucleotide-activated protein kinase complex; and nucleus. Orthologous to human PRKAB1 (protein kinase AMP-activated non-catalytic subunit beta 1).
Genome Resources: Alliance (1),  Gene:335232 (1),  Ensembl(GRCz11):ENSDARG00000046143 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56652]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa16513 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH prkab1b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH prkab1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process phosphorylation (more)
    Cellular Component cytoplasm (more)
    Molecular Function kinase activity (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR006828 Association with the SNF1 complex (ASC) domain
    Domain IPR032640 AMP-activated protein kinase, glycogen-binding domain
    Homologous_superfamily IPR013783 Immunoglobulin-like fold
    Homologous_superfamily IPR014756 Immunoglobulin E-set
    Homologous_superfamily IPR037256 ASC domain superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA prkab1b-201 (1)    Ensembl 1305
    prkab1b-202 (1)    Ensembl 946
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM prkab1b No data available
    MARKER RELATIONSHIPS
    prkab1b Contained in: [BAC] DKEY-63D15 (1) (order this)
    prkab1b Encodes: [EST] fk93d05, fw87e09 (1)
    [cDNA] MGC:56652, MGC:76975 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_214713 (1) 1365 nt
    Genomic GenBank:BX005328 (1) 272840 nt Blast at MegaBLAST
    Polypeptide UniProtKB:Q6NY31 (1) 260 aa
    Sequence Information (all 21)
    ORTHOLOGY for prkab1b ( Chr: 8 )
    CITATIONS (21)