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General Information
ZIRC
ZFIN ID: ZDB-GENE-030131-7155
Gene Name: si:ch211-89o9.6
Gene Symbol: si:ch211-89o9.6
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: fk90e02, wu:fk90e02 (1)

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(Including Attributions)
Location: Chr: 1 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have metal ion binding activity and nucleic acid binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to the nucleus.

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH si:ch211-89o9.6 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH si:ch211-89o9.6 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of transcription, DNA-templated (more)
Cellular Component nucleus (more)
Molecular Function metal ion binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR013087 (1)
  • InterPro:IPR036236 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS50157 (1)
  • Pfam:PF00096 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA si:ch211-89o9.6-201 (1) 2491
    si:ch211-89o9.6-202 (1) 1861
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM si:ch211-89o9.6 No data available
    MARKER RELATIONSHIPS
    si:ch211-89o9.6 Contained in: [BAC] CH211-89O9 (1) (order this)
    si:ch211-89o9.6 Encodes: [EST] fk90e02
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_682563 (1)
    Genomic GenBank:BX511019 (1) 180744 bp
    Select Tool
    Polypeptide UniProtKB:F1QV78 (1) 582 aa
    Sequence Clusters UniGene:10049 (1)
    Sequence Information (all 17)
    ORTHOLOGY for si:ch211-89o9.6 ( Chr: 1 )
    CITATIONS (14)