ZFIN ID: ZDB-GENE-030131-6858
Gene Name: prefoldin 5
Gene Symbol: pfdn5    Nomenclature History

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Previous Names: wu:fa09c11, wu:fb38c05, zgc:100894

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have unfolded protein binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to cytoplasm and prefoldin complex. Orthologous to human PFDN5 (prefoldin subunit 5).
Genome Resources: Alliance (1),  Gene:568182 (1),  Ensembl(GRCz11):ENSDARG00000035043 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6893947]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la025554Tg Transgenic Insertion Unknown Unknown DNA
sa40747 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pfdn5 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH pfdn5 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein folding (more)
    Cellular Component prefoldin complex (more)
    Molecular Function unfolded protein binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA pfdn5-201 (1)    Ensembl 1236
    ncRNA pfdn5-002 (1)    Ensembl 681
    pfdn5-003 (1)    Ensembl 684
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pfdn5 No data available
    MARKER RELATIONSHIPS
    pfdn5 Contained in: [BAC] CH211-233B16 (1)
    pfdn5 Encodes: [EST] fa09c11, fb38c05, IMAGE:6893947 (1)
    [cDNA] MGC:100894 (1), MGC:174348 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001111195 (1) 1126 nt
    Genomic GenBank:AL954698 (1) 177161 nt
    Select Tool
    Polypeptide UniProtKB:A9JT16 (1) 153 aa
    Sequence Information (all 20)
    ORTHOLOGY for pfdn5 ( Chr: 6 )
    CITATIONS (28)