ZFIN ID: ZDB-GENE-030131-6837
Gene Name: ribulose-5-phosphate-3-epimerase
Gene Symbol: rpe
Sequence Ontology ID : SO:0000704

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Previous Names: ik:tdsubc_2c8, wu:fa07h08, wu:fb93d11, wu:fc20b11, xx:tdsubc_2c8

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa21487 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 2 figures from Shim et al., 2016
    Observed in:
    DISEASE ASSOCIATED WITH rpe HUMAN ORTHOLOG No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cilium assembly (more)
    Cellular Component cytosol (more)
    Molecular Function catalytic activity (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000056 (1)
  • InterPro:IPR011060 (1)
  • InterPro:IPR013785 (1)
  • InterPro:IPR026019 (1)
  • PROSITE:PS01085 (1)
  • PROSITE:PS01086 (1)
  • Pfam:PF00834 (1)
  • EC:5.1.3.1 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rpe-001 (1) 1660
    rpe-002 (1) 538
    ncRNA rpe-003 (1) 844
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rpe No data available
    MARKER RELATIONSHIPS
    rpeContained in: [BAC] DKEYP-74A11 (1)
    rpeEncodes: [EST] fa07h08, fb93d11 (1), fc20b11, tdsubc_2c8 (1)
    [cDNA] MGC:73208 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001243424 (1)
    Genomic GenBank:CR545476 (1) 202562bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q6PBW9 (1) 228aa
    Sequence Clusters UniGene:75331 (1)
    Sequence Information (all 21)
    OTHER rpe GENE PAGES
  • Alliance (1)
  • Gene:334897 (1)
  • VEGA:OTTDARG00000026616 (1)
  • ORTHOLOGY for rpe (Chr: 9)
    CITATIONS (17)