ZFIN ID: ZDB-GENE-030131-683
Gene Name: PGAM family member 5, serine/threonine protein phosphatase, mitochondrial
Gene Symbol: pgam5    Nomenclature History

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Previous Names: fb39f09, si:dkey-69p22.1 (1), wu:fb39f09, wu:fj34f06, zgc:112041, zgc:92057

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have phosphoprotein phosphatase activity. Predicted to be involved in programmed cell death. Predicted to localize to integral component of membrane and mitochondrial outer membrane. Orthologous to human PGAM5 (PGAM family member 5, mitochondrial serine/threonine protein phosphatase).
Genome Resources: Alliance (1),  Gene:492357 (1),  Ensembl(GRCz11):ENSDARG00000035608 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:92057]
  1 figure (1 image) from Thisse et al., 2004 [MGC:112041]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-pgam5 N/A 2
PHENOTYPE No data available
DISEASE ASSOCIATED WITH pgam5 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH pgam5 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process programmed cell death (more)
Cellular Component integral component of membrane (more)
Molecular Function hydrolase activity (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA pgam5-201 (1)    Ensembl 2384
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM pgam5 No data available
MARKER RELATIONSHIPS
pgam5 Contained in: [BAC] DKEY-69P22 (1) (order this)
pgam5 Encodes: [EST] fb39f09, fj34f06 (1)
[cDNA] MGC:92057 (1), MGC:112041 (1), MGC:191830 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001007323 (1) 2433 nt
Genomic GenBank:CR388061 (1) 122069 nt
Select Tool
Polypeptide UniProtKB:B2GQ99 (1) 289 aa
Sequence Information (all 24)
ORTHOLOGY for pgam5 ( Chr: 5 )
CITATIONS (27)