header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-030131-6794
Gene Name: general transcription factor IIE, polypeptide 2, beta
Gene Symbol: gtf2e2    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: wu:fa05d01

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to contribute to TFIIH-class transcription factor complex binding activity. Predicted to be involved in transcription initiation from RNA polymerase II promoter. Predicted to localize to the transcription factor TFIIE complex. Orthologous to human GTF2E2 (general transcription factor IIE subunit 2).
Genome Resources: Alliance (1), Gene:334854 (1), Ensembl(GRCz11):ENSDARG00000012672 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (6 images) from Thisse et al., 2004 [MGC:77074]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa32665 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-gtf2e2 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH gtf2e2 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Trichothiodystrophy 6, nonphotosensitive 616943
    DISEASE ASSOCIATED WITH gtf2e2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process transcription initiation from RNA polymerase II promoter (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 5)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA gtf2e2-201 (1)    Ensembl 1287
    gtf2e2-202 (1)    Ensembl 894
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM gtf2e2No data available
    MARKER RELATIONSHIPS
    gtf2e2Contained in: [BAC] CH211-209P5 (1) (order this), DKEY-92J12 (1) (order this)
    gtf2e2Encodes: [EST] fa05d01
    [cDNA] MGC:77074 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212731 (1) 1313bp
    Genomic GenBank:BX469934 (1) 225586bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8PXU1 (1) 333aa
    Sequence Clusters UniGene:51 (1)
    Sequence Information (all 15)
    ORTHOLOGY for gtf2e2 (Chr: 1)
    CITATIONS (19)