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ZIRC
ZFIN ID: ZDB-GENE-030131-6719
Gene Name: carnitine palmitoyltransferase 2
Gene Symbol: cpt2    Nomenclature History

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Previous Names: wu:fa03e08, wu:fb54a02, zgc:101627

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to have carnitine O-palmitoyltransferase activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to localize to the mitochondrion. Human ortholog(s) of this gene implicated in brain disease; lipid metabolism disorder; and muscular disease. Is expressed in liver. Orthologous to human CPT2 (carnitine palmitoyltransferase 2).
Genome Resources: Alliance (1),  Gene:100005717 (1),  Ensembl(GRCz11):ENSDARG00000038618 (1)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:101627]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la016296Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la026408Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cpt2 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    carnitine palmitoyltransferase II deficiency Alliance CPT II deficiency, infantile 600649
    CPT II deficiency, lethal neonatal 608836
    CPT II deficiency, myopathic, stress-induced 255110
    {Encephalopathy, acute, infection-induced, 4, susceptibility to} 614212
    DISEASE ASSOCIATED WITH cpt2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process fatty acid beta-oxidation (more)
    Cellular Component membrane (more)
    Molecular Function carnitine O-palmitoyltransferase activity (more)
    GO Terms (all 9)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cpt2-201 (1)    Ensembl 2608
    cpt2-202 (1)    Ensembl 934
    ncRNA cpt2-003 (1)    Ensembl 751
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cpt2 No data available
    MARKER RELATIONSHIPS
    cpt2 Contained in: [BAC] CH211-216K22 (1) (order this)
    cpt2 Contains: [SNP] rs3728147 (1)
    cpt2 Encodes: [EST] fa03e08, fb54a02
    [cDNA] MGC:101627 (1) (order this), MGC:191737 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007447 (1) 2664 bp
    Genomic GenBank:BX927144 (1) 168503 bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8Q0N5 (1) 669 aa
    Sequence Clusters UniGene:75429 (1)
    Sequence Information (all 21)
    ORTHOLOGY for cpt2 ( Chr: 8 )
    CITATIONS (35)