Gene

seh1l

ID

ZDB-GENE-030131-6689

Name

SEH1-like (S. cerevisiae)

Symbol

seh1l Nomenclature History

Previous Names

fa02g03
wu:fa02g03
zgc:55977 (1)

Type

protein_coding_gene

Location

Chr: 19 Mapping Details/Browsers

Description

Predicted to have structural molecule activity. Predicted to be involved in several processes, including attachment of mitotic spindle microtubules to kinetochore; nuclear pore organization; and positive regulation of TORC1 signaling. Predicted to colocalize with kinetochore. Orthologous to human SEH1L (SEH1 like nucleoporin).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

IMAGE:7148124 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With seh1l Human Ortholog

No data available

Associated With seh1l Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR037363	Sec13/Seh1 family
Homologous_superfamily	IPR015943	WD40/YVTN repeat-like-containing domain superfamily
Homologous_superfamily	IPR036322	WD40-repeat-containing domain superfamily
Repeat	IPR001680	WD40 repeat
Repeat	IPR020472	G-protein beta WD-40 repeat

Domain Details Per Protein

Protein	Length	G-protein beta WD-40 repeat	Sec13/Seh1 family	WD40 repeat	WD40-repeat-containing domain superfamily	WD40/YVTN repeat-like-containing domain superfamily
UniProtKB:A0A8M9PRC2 InterPro	410
UniProtKB:Q6TGU2 InterPro	364

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	seh1l-201 (1) Ensembl	Havana	2939 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	seh1l-202 (1) Ensembl	Havana	933 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	seh1l-203 (1) Ensembl	Havana	643 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	seh1l-003 (1) Ensembl	Havana	638 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations